Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SDHAP3-202ENST00000515467 728 ntBASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 AC010336.2-201ENST00000564226 506 ntBASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 AC051619.7-201ENST00000568314 623 ntBASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.45□□□□□ -0.74
UBE2D4Q9Y2X8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC012617.1-204ENST00000586340 2305 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC093525.8-201ENST00000624099 1342 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 TMEM198B-204ENST00000484016 896 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 GAPDHP40-201ENST00000505218 1006 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 YBX1P5-201ENST00000509441 847 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 MIR4469-201ENST00000583919 79 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 TEX28P1-201ENST00000613479 1221 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 TEX28P2-201ENST00000617764 1221 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC130686.1-201ENST00000622936 2466 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms