Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.62□□□□□ -0.39
RNF7Q9UBF6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 ATP5G2P4-201ENST00000442175 420 ntBASIC12.61□□□□□ -0.39
RNF7Q9UBF6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 AC138696.2-201ENST00000607376 223 ntBASIC12.61□□□□□ -0.39
RNF7Q9UBF6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 MIR6775-201ENST00000617557 69 ntBASIC12.61□□□□□ -0.39
RNF7Q9UBF6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 AP000593.2-201ENST00000542775 1433 ntBASIC12.61□□□□□ -0.39
RNF7Q9UBF6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF7Q9UBF6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 CICP23-201ENST00000605013 2741 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 MIR658-201ENST00000385210 100 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 KRT223P-202ENST00000449164 1292 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 AC022210.1-201ENST00000449856 793 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 AL391280.1-201ENST00000506969 1062 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 COX5BP1-201ENST00000507622 393 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RNF7Q9UBF6 AC106820.3-201ENST00000561653 397 ntBASIC12.6□□□□□ -0.39
RNF7Q9UBF6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms