Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 COX6A1P2-201ENST00000620597 330 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AC051619.9-201ENST00000623237 597 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 LINC01101-201ENST00000622953 1884 ntBASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 NPM1P43-201ENST00000558669 786 ntBASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AC103810.10-201ENST00000606504 343 ntBASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 RN7SL736P-201ENST00000613111 269 ntBASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 YRDCP1-201ENST00000621419 643 ntBASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HCFC1R1Q9NWW0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AC138035.3-201ENST00000622706 2791 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AC091951.1-201ENST00000512854 2465 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AP000356.3-201ENST00000382243 753 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 XBP1P1-201ENST00000436573 652 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 MIR4750-201ENST00000584564 56 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AC138894.2-201ENST00000602838 371 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 MIR6842-201ENST00000612539 65 ntBASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.34■□□□□ 0.05
HCFC1R1Q9NWW0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms