Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 CLUHP2-201ENST00000426660 1303 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 MYADML-201ENST00000474610 2147 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 TDH-203ENST00000531764 1110 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AC010319.3-201ENST00000597028 470 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AC097376.2-205ENST00000610159 5334 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 MIR6074-201ENST00000612054 107 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 AL138709.1-201ENST00000614840 1693 ntBASIC14.27□□□□□ -0.12
BRF2Q9HAW0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
BRF2Q9HAW0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 FTLP10-202ENST00000505798 471 ntBASIC14.27□□□□□ -0.13
BRF2Q9HAW0 ALG3P1-201ENST00000508806 1114 ntBASIC14.27□□□□□ -0.13
BRF2Q9HAW0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 BX088702.1-201ENST00000610784 235 ntBASIC14.27□□□□□ -0.13
BRF2Q9HAW0 AC138466.3-201ENST00000619983 221 ntBASIC14.27□□□□□ -0.13
BRF2Q9HAW0 RPSAP52-203ENST00000622976 1023 ntBASIC14.27□□□□□ -0.13
BRF2Q9HAW0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BRF2Q9HAW0 AC015656.1-201ENST00000624209 3578 ntBASIC14.27□□□□□ -0.13
BRF2Q9HAW0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BRF2Q9HAW0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms