Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AL512306.1-201ENST00000432698 848 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AL354861.1-201ENST00000445213 355 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AP003398.1-201ENST00000531124 318 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AP000911.2-201ENST00000534330 502 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AC027237.1-201ENST00000560942 655 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AC127024.7-201ENST00000625101 200 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 AP002353.1-201ENST00000528257 1599 ntBASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDH11YQ9BZA8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 AC092638.2-201ENST00000441105 947 ntBASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 RN7SL470P-201ENST00000583069 259 ntBASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 LINC01815-202ENST00000641468 1409 ntBASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH11YQ9BZA8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH11YQ9BZA8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PCDH11YQ9BZA8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH11YQ9BZA8 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AC138701.2-201ENST00000553634 226 ntBASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AC005041.3-201ENST00000606287 649 ntBASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 AC006504.5-208ENST00000588784 2401 ntBASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH11YQ9BZA8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 GUSBP10-201ENST00000417412 665 ntBASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AL157792.1-201ENST00000488281 530 ntBASIC19■□□□□ 0.63
PCDH11YQ9BZA8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH11YQ9BZA8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms