Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL365209.1-201ENST00000624418 6473 ntBASIC17.81■□□□□ 0.44
DDX11Q96FC9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AC007191.1-201ENST00000623179 2995 ntBASIC17.8■□□□□ 0.44
DDX11Q96FC9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AC026954.1-201ENST00000429771 1293 ntBASIC17.8■□□□□ 0.44
DDX11Q96FC9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 KRT90P-201ENST00000549264 1064 ntBASIC17.8■□□□□ 0.44
DDX11Q96FC9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AL138799.1-201ENST00000448213 1675 ntBASIC17.8■□□□□ 0.44
DDX11Q96FC9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX11Q96FC9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX11Q96FC9 AL158070.2-201ENST00000623713 1621 ntBASIC17.8■□□□□ 0.44
DDX11Q96FC9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDX11Q96FC9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 AC097359.2-201ENST00000604992 2389 ntBASIC17.79■□□□□ 0.44
DDX11Q96FC9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms