Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APH1AQ96BI3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AC106820.3-201ENST00000561653 397 ntBASIC13.27□□□□□ -0.29
APH1AQ96BI3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AC010328.2-201ENST00000597698 1111 ntBASIC13.27□□□□□ -0.29
APH1AQ96BI3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 SALL4P5-201ENST00000419001 1760 ntBASIC13.27□□□□□ -0.29
APH1AQ96BI3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.27□□□□□ -0.29
APH1AQ96BI3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APH1AQ96BI3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 RPS2P32-201ENST00000439199 892 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 HOMER2P2-201ENST00000451621 847 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 BNIP3P42-201ENST00000454982 569 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 AL391280.1-201ENST00000506969 1062 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 RN7SL713P-201ENST00000582127 302 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 BNIP3P29-201ENST00000598302 571 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 AC011447.5-201ENST00000616168 564 ntBASIC13.26□□□□□ -0.29
APH1AQ96BI3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms