Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.22■□□□□ 0.51
RPGRQ92834 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.22■□□□□ 0.51
RPGRQ92834 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RPGRQ92834 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 AC112693.3-201ENST00000624819 1983 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 MIR557-201ENST00000385239 98 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.21■□□□□ 0.51
RPGRQ92834 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.21■□□□□ 0.51
RPGRQ92834 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.21■□□□□ 0.51
RPGRQ92834 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 RPSAP15-201ENST00000448168 861 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 DUTP3-201ENST00000450025 415 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 CHCHD2P9-201ENST00000461726 456 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.21■□□□□ 0.51
RPGRQ92834 AC130709.1-201ENST00000484779 1212 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.21■□□□□ 0.51
RPGRQ92834 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.21■□□□□ 0.51
RPGRQ92834 MIR4522-201ENST00000584932 87 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.21■□□□□ 0.51
RPGRQ92834 AC007326.1-201ENST00000604539 458 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 AC087392.5-201ENST00000612517 489 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 AC126365.1-201ENST00000578585 1514 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RPGRQ92834 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RPGRQ92834 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.21■□□□□ 0.51
RPGRQ92834 AHCYP4-201ENST00000419201 1315 ntBASIC18.21■□□□□ 0.51
RPGRQ92834 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPGRQ92834 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RPGRQ92834 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RPGRQ92834 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RPGRQ92834 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RPGRQ92834 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPGRQ92834 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
RPGRQ92834 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPGRQ92834 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPGRQ92834 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.2■□□□□ 0.5
RPGRQ92834 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.2■□□□□ 0.5
RPGRQ92834 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RPGRQ92834 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RPGRQ92834 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.2■□□□□ 0.5
RPGRQ92834 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPGRQ92834 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.2■□□□□ 0.5
RPGRQ92834 AL807761.2-201ENST00000422849 729 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms