Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 AC023024.2-201ENST00000623561 1993 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 MROH4P-201ENST00000431302 1578 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 TPM3P8-201ENST00000330554 643 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 MIR326-201ENST00000362220 95 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 ACTBP8-201ENST00000403258 1108 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 AC078819.1-201ENST00000547454 765 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 AC012085.1-201ENST00000548270 765 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 RN7SL48P-201ENST00000579283 293 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 MIR4313-201ENST00000580760 101 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 MIR3615-201ENST00000581999 87 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 AL118558.3-201ENST00000607414 1079 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 AC244452.3-201ENST00000636814 210 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 AC006453.4-201ENST00000636949 1252 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.18□□□□□ -0.14
TM9SF4Q92544 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 C8orf49-201ENST00000525043 1968 ntBASIC14.18□□□□□ -0.14
TM9SF4Q92544 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF4Q92544 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 OR2I1P-210ENST00000642037 4691 ntBASIC14.17□□□□□ -0.14
TM9SF4Q92544 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF4Q92544 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF4Q92544 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms