Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 AC091804.1-201ENST00000486888 567 ntBASIC13.34□□□□□ -0.27
RNF138Q8WVD3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 SNORD3B-2-202ENST00000571722 791 ntBASIC13.34□□□□□ -0.27
RNF138Q8WVD3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 AC133540.1-201ENST00000620845 1019 ntBASIC13.34□□□□□ -0.27
RNF138Q8WVD3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNF138Q8WVD3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.33□□□□□ -0.27
RNF138Q8WVD3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.33□□□□□ -0.27
RNF138Q8WVD3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.33□□□□□ -0.27
RNF138Q8WVD3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.33□□□□□ -0.27
RNF138Q8WVD3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 XBP1P1-201ENST00000436573 652 ntBASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC021723.1-201ENST00000486306 515 ntBASIC13.33□□□□□ -0.28
RNF138Q8WVD3 SCARNA21-201ENST00000517026 139 ntBASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC005586.2-201ENST00000563946 837 ntBASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 RN7SL163P-201ENST00000583100 276 ntBASIC13.33□□□□□ -0.28
RNF138Q8WVD3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AL132994.2-201ENST00000603120 687 ntBASIC13.33□□□□□ -0.28
RNF138Q8WVD3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF138Q8WVD3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 AC007191.1-201ENST00000623179 2995 ntBASIC13.32□□□□□ -0.28
RNF138Q8WVD3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.32□□□□□ -0.28
RNF138Q8WVD3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms