Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 FCHO1-218ENST00000596951 2979 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ADGRG1-266ENST00000568908 3852 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AC092720.2-201ENST00000602388 1665 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 LINC01001-201ENST00000526704 2553 ntTSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MKRN5P-201ENST00000445263 1467 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 LINC00661-204ENST00000549354 3340 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ADAM22-201ENST00000265727 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MARK2P16-201ENST00000605714 1723 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AL024493.1-201ENST00000449217 833 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AC004585.1-201ENST00000578280 1014 ntTSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AC008993.1-201ENST00000632280 776 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AL358472.4-201ENST00000633140 710 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 P2RX6-202ENST00000413302 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 OR4D2-202ENST00000641866 2011 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AC011511.5-201ENST00000589379 3219 ntBASIC8.98□□□□□ -0.97
SVIPQ8NHG7 LEMD1-AS1-201ENST00000447832 2781 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 C3orf14-206ENST00000494481 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 AC006213.1-201ENST00000586860 2550 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 FANCM-208ENST00000556036 2354 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 EPM2A-217ENST00000639423 2886 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 INPP4A-210ENST00000523221 2934 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SVIPQ8NHG7 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 GFOD2-202ENST00000602279 5507 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 COL14A1-201ENST00000247781 3450 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC004854.2-201ENST00000608450 1441 ntBASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 BCO2-213ENST00000531169 2493 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 TCF4-206ENST00000537856 1996 ntTSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms