Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 AP005117.1-202ENST00000581724 1908 ntBASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL22A1Q8NFW1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 HLA-DMA-202ENST00000395303 1007 ntBASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 MAGEA7P-201ENST00000436482 942 ntBASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 BMF-206ENST00000558774 671 ntTSL 3 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 AL118508.1-201ENST00000613502 2345 ntBASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL22A1Q8NFW1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 MIR611-201ENST00000384869 67 ntBASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 AC245369.7-201ENST00000631386 350 ntBASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 HLF-202ENST00000430986 1385 ntTSL 2 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 AC020931.1-201ENST00000589622 1346 ntBASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL22A1Q8NFW1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 NALT1-202ENST00000450304 437 ntTSL 3 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 RN7SL455P-201ENST00000580629 282 ntBASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.14■□□□□ 0.66
COL22A1Q8NFW1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 CCT8L1P-201ENST00000465400 1674 ntBASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 AC053503.3-201ENST00000448375 114 ntBASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.14■□□□□ 0.65
COL22A1Q8NFW1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL22A1Q8NFW1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms