Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF248Q8NDW4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 POM121L8P-201ENST00000417732 1281 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 POM121L9P-203ENST00000441984 1285 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AC098935.1-201ENST00000446057 611 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 MARK2P5-201ENST00000507649 634 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AC022616.1-201ENST00000518688 554 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 RN7SL736P-201ENST00000613111 269 ntBASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF248Q8NDW4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CICP13-201ENST00000422015 2789 ntBASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 AC087481.3-201ENST00000602886 1894 ntBASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 AC106820.3-201ENST00000561653 397 ntBASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 AC020922.3-201ENST00000595064 547 ntBASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms