Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FAM86HP-204ENST00000513466 959 ntBASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TRAM1L1Q8N609 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 BTBD6P1-201ENST00000412176 1267 ntBASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 GOLGA2P4-201ENST00000441462 777 ntBASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAM1L1Q8N609 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
TRAM1L1Q8N609 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 MIR326-201ENST00000362220 95 ntBASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 HSPB1P2-201ENST00000448722 546 ntBASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 RPSAP36-202ENST00000494591 1261 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms