Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AC005034.1-201ENST00000426657 489 ntBASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AC138466.3-201ENST00000619983 221 ntBASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AC132938.4-201ENST00000623835 848 ntBASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF2Q8N5M1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF2Q8N5M1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 FAM197Y7-201ENST00000432892 766 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 MESTP3-201ENST00000503460 968 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 FTLP10-202ENST00000505798 471 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 RNA5SP486-201ENST00000515961 83 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 KRT90P-201ENST00000549264 1064 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC244669.2-201ENST00000612320 853 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC138951.2-201ENST00000623455 1161 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AL138725.1-201ENST00000407347 1314 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC015656.1-201ENST00000624209 3578 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC140479.7-201ENST00000636301 2332 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC068418.2-201ENST00000577309 3703 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 AC011840.2-201ENST00000563063 1520 ntBASIC15.33■□□□□ 0.04
ATPAF2Q8N5M1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms