Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC170Q8IYT3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC170Q8IYT3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC170Q8IYT3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC170Q8IYT3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC170Q8IYT3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC170Q8IYT3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 TLE1P1-201ENST00000422965 589 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AC025678.2-201ENST00000562061 970 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 SNHG9-202ENST00000564014 471 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AL590560.3-201ENST00000623350 461 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 AL603764.1-201ENST00000636452 321 ntBASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC170Q8IYT3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC009477.1-201ENST00000452936 217 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC097493.3-201ENST00000509725 367 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 RARRES2P5-201ENST00000564013 466 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AL049840.4-201ENST00000602422 811 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AL662799.1-202ENST00000614205 422 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 BX539320.1-201ENST00000623759 877 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 KRT8P35-201ENST00000483942 1338 ntBASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC170Q8IYT3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms