Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 AC138466.3-201ENST00000619983 221 ntBASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MTATP6P19-201ENST00000413797 659 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MESTP3-201ENST00000503460 968 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AP000812.2-201ENST00000538934 718 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AC133552.6-201ENST00000613406 534 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MIR6775-201ENST00000617557 69 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 AL390755.1-201ENST00000623716 2027 ntBASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.04■□□□□ -0
LYSMD3Q7Z3D4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 RN7SL832P-201ENST00000607781 1756 ntBASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AC041040.2-201ENST00000622926 2899 ntBASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AL391280.1-201ENST00000506969 1062 ntBASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.03■□□□□ -0
LYSMD3Q7Z3D4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms