Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CASC4Q6P4E1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 AL645937.2-201ENST00000396808 931 ntBASIC15.32■□□□□ 0.04
CASC4Q6P4E1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 AC004790.1-201ENST00000612686 536 ntBASIC15.32■□□□□ 0.04
CASC4Q6P4E1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 AC023090.2-201ENST00000625182 2110 ntBASIC15.32■□□□□ 0.04
CASC4Q6P4E1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CASC4Q6P4E1 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 MEP1AP4-201ENST00000423244 1087 ntBASIC15.31■□□□□ 0.04
CASC4Q6P4E1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.31■□□□□ 0.04
CASC4Q6P4E1 GNAQP1-201ENST00000444815 1067 ntBASIC15.31■□□□□ 0.04
CASC4Q6P4E1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 AC104596.2-201ENST00000512793 793 ntBASIC15.31■□□□□ 0.04
CASC4Q6P4E1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 AC093813.1-201ENST00000605066 256 ntBASIC15.31■□□□□ 0.04
CASC4Q6P4E1 BX539320.1-201ENST00000623759 877 ntBASIC15.31■□□□□ 0.04
CASC4Q6P4E1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms