Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AL031133.1-201ENST00000406807 723 ntBASIC11.34□□□□□ -0.59
MRPL54Q6P161 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.34□□□□□ -0.59
MRPL54Q6P161 AC136604.1-201ENST00000418535 575 ntBASIC11.34□□□□□ -0.59
MRPL54Q6P161 AL596275.1-201ENST00000423464 877 ntBASIC11.34□□□□□ -0.59
MRPL54Q6P161 EEF1DP4-201ENST00000446006 880 ntBASIC11.34□□□□□ -0.59
MRPL54Q6P161 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 AC116407.4-201ENST00000623319 1061 ntBASIC11.34□□□□□ -0.59
MRPL54Q6P161 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL54Q6P161 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.33□□□□□ -0.6
MRPL54Q6P161 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 AGGF1P1-201ENST00000509500 2073 ntBASIC11.33□□□□□ -0.6
MRPL54Q6P161 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 FAM86EP-206ENST00000510506 987 ntBASIC11.33□□□□□ -0.6
MRPL54Q6P161 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
MRPL54Q6P161 TCAM1P-207ENST00000485295 1537 ntBASIC11.33□□□□□ -0.6
MRPL54Q6P161 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MRPL54Q6P161 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms