Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC144NLQ6NUI1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AL009178.2-201ENST00000597278 2719 ntBASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AC007969.1-201ENST00000433675 447 ntBASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 FTLP10-202ENST00000505798 471 ntBASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AC026434.2-201ENST00000506094 1078 ntBASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCDC144NLQ6NUI1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 AC144831.1-201ENST00000573312 2656 ntBASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 AL137784.3-201ENST00000623858 2288 ntBASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 ARSEP1-201ENST00000420443 635 ntBASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC144NLQ6NUI1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms