Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC006486.2-201ENST00000624246 2199 ntBASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 AL021707.6-201ENST00000609212 491 ntBASIC21.86■■□□□ 1.09
CDC42BPAQ5VT25 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 AL672207.1-201ENST00000328462 1570 ntBASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 AC013553.1-201ENST00000560906 267 ntBASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42BPAQ5VT25 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 CTBP2P8-201ENST00000422584 1330 ntBASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 KRT17P4-201ENST00000429445 819 ntBASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 AC006529.1-201ENST00000459978 637 ntBASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 RN7SL23P-201ENST00000484055 275 ntBASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 MECR-202ENST00000373791 2416 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 CICP6-201ENST00000457191 2729 ntBASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42BPAQ5VT25 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AQP7P5-201ENST00000428759 1049 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AQP7P4-201ENST00000447083 1042 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AQP7P2-201ENST00000453967 1041 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 RNA5SP406-201ENST00000516106 112 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 SKA2-205ENST00000580541 689 ntTSL 3 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AQP7P3-201ENST00000624547 1041 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 LINC00244-201ENST00000625073 613 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AC002472.4-201ENST00000641915 272 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AJ011931.1-201ENST00000618749 2492 ntBASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPAQ5VT25 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms