Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 AC013268.4-201ENST00000637413 2228 ntBASIC17.35■□□□□ 0.37
CERKLQ49MI3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.35■□□□□ 0.37
CERKLQ49MI3 AL596276.2-201ENST00000447525 331 ntBASIC17.35■□□□□ 0.37
CERKLQ49MI3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 AC090857.1-201ENST00000527400 390 ntBASIC17.35■□□□□ 0.37
CERKLQ49MI3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 AL136172.1-201ENST00000598590 1394 ntBASIC17.35■□□□□ 0.37
CERKLQ49MI3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.35■□□□□ 0.37
CERKLQ49MI3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CERKLQ49MI3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 ISCA2P1-201ENST00000425548 448 ntBASIC17.34■□□□□ 0.37
CERKLQ49MI3 AC078875.1-201ENST00000431907 724 ntBASIC17.34■□□□□ 0.37
CERKLQ49MI3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 AC006122.1-201ENST00000493323 440 ntBASIC17.34■□□□□ 0.37
CERKLQ49MI3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 AF254983.2-201ENST00000612331 135 ntBASIC17.34■□□□□ 0.37
CERKLQ49MI3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 AC079336.7-201ENST00000623428 1078 ntBASIC17.34■□□□□ 0.37
CERKLQ49MI3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CERKLQ49MI3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CERKLQ49MI3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.33■□□□□ 0.37
CERKLQ49MI3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CERKLQ49MI3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CERKLQ49MI3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.33■□□□□ 0.37
CERKLQ49MI3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CERKLQ49MI3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CERKLQ49MI3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CERKLQ49MI3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CERKLQ49MI3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CERKLQ49MI3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 RBM8B-201ENST00000555532 525 ntBASIC17.33■□□□□ 0.36
CERKLQ49MI3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 MIR3907-201ENST00000579424 151 ntBASIC17.33■□□□□ 0.36
CERKLQ49MI3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms