Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 AC010141.1-201ENST00000411585 623 ntBASIC18.28■□□□□ 0.52
ATP2B3Q16720 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 AC126915.1-201ENST00000522847 1038 ntBASIC18.28■□□□□ 0.52
ATP2B3Q16720 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 LINC00528-201ENST00000600723 2160 ntBASIC18.28■□□□□ 0.52
ATP2B3Q16720 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP2B3Q16720 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP2B3Q16720 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 E2F3P2-201ENST00000447755 1422 ntBASIC18.27■□□□□ 0.52
ATP2B3Q16720 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AC139749.1-202ENST00000617529 3139 ntBASIC18.27■□□□□ 0.52
ATP2B3Q16720 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 GCOM2-201ENST00000509133 1104 ntBASIC18.27■□□□□ 0.52
ATP2B3Q16720 AC131206.1-201ENST00000538078 1211 ntBASIC18.27■□□□□ 0.52
ATP2B3Q16720 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AC103810.3-201ENST00000583567 96 ntBASIC18.27■□□□□ 0.52
ATP2B3Q16720 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 AC009955.4-201ENST00000597192 544 ntBASIC18.27■□□□□ 0.52
ATP2B3Q16720 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP2B3Q16720 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP2B3Q16720 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2B3Q16720 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
ATP2B3Q16720 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
ATP2B3Q16720 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2B3Q16720 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2B3Q16720 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.27■□□□□ 0.51
ATP2B3Q16720 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2B3Q16720 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2B3Q16720 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP2B3Q16720 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 AC091804.1-201ENST00000486888 567 ntBASIC18.26■□□□□ 0.51
ATP2B3Q16720 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATP2B3Q16720 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 AL133338.1-201ENST00000565695 1517 ntBASIC18.26■□□□□ 0.51
ATP2B3Q16720 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP2B3Q16720 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms