Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.33■□□□□ 0.68
COL16A1Q07092 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COL16A1Q07092 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COL16A1Q07092 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COL16A1Q07092 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COL16A1Q07092 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.33■□□□□ 0.68
COL16A1Q07092 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19.33■□□□□ 0.68
COL16A1Q07092 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.33■□□□□ 0.68
COL16A1Q07092 DPY19L2P4-201ENST00000479881 442 ntBASIC19.33■□□□□ 0.68
COL16A1Q07092 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC19.33■□□□□ 0.68
COL16A1Q07092 KRT8P34-201ENST00000577607 1044 ntBASIC19.33■□□□□ 0.68
COL16A1Q07092 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COL16A1Q07092 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC19.33■□□□□ 0.68
COL16A1Q07092 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
COL16A1Q07092 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
COL16A1Q07092 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COL16A1Q07092 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.32■□□□□ 0.68
COL16A1Q07092 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.32■□□□□ 0.68
COL16A1Q07092 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COL16A1Q07092 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 SIGLEC20P-201ENST00000595243 1311 ntBASIC19.32■□□□□ 0.68
COL16A1Q07092 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.32■□□□□ 0.68
COL16A1Q07092 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 AC087481.3-201ENST00000602886 1894 ntBASIC19.32■□□□□ 0.68
COL16A1Q07092 LINC01101-201ENST00000622953 1884 ntBASIC19.32■□□□□ 0.68
COL16A1Q07092 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COL16A1Q07092 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.32■□□□□ 0.68
COL16A1Q07092 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC19.32■□□□□ 0.68
COL16A1Q07092 RNU1-80P-201ENST00000459500 161 ntBASIC19.32■□□□□ 0.68
COL16A1Q07092 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC19.32■□□□□ 0.68
COL16A1Q07092 AC022447.5-201ENST00000504817 392 ntBASIC19.32■□□□□ 0.68
COL16A1Q07092 CMC2-204ENST00000562713 573 ntTSL 3 BASIC19.32■□□□□ 0.68
COL16A1Q07092 CMC2-209ENST00000565108 399 ntTSL 2 BASIC19.32■□□□□ 0.68
COL16A1Q07092 CLPP-205ENST00000596605 646 ntTSL 2 BASIC19.32■□□□□ 0.68
COL16A1Q07092 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC19.32■□□□□ 0.68
COL16A1Q07092 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.32■□□□□ 0.68
COL16A1Q07092 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
COL16A1Q07092 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL16A1Q07092 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL16A1Q07092 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC19.31■□□□□ 0.68
COL16A1Q07092 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 AC103563.1-201ENST00000429316 123 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 HNRNPA1P10-201ENST00000444945 962 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL16A1Q07092 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 AC008494.1-201ENST00000497612 796 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 AC099328.1-201ENST00000498809 1030 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 AC132812.1-201ENST00000583145 892 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 IFNL3P1-201ENST00000595082 501 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 AC113385.2-201ENST00000614465 762 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 OR3A1-202ENST00000615105 966 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
COL16A1Q07092 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COL16A1Q07092 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 AC006504.5-208ENST00000588784 2401 ntBASIC19.31■□□□□ 0.68
COL16A1Q07092 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL16A1Q07092 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.3■□□□□ 0.68
COL16A1Q07092 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.3■□□□□ 0.68
COL16A1Q07092 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL16A1Q07092 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms