Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
NKX6-1P78426 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-1P78426 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX6-1P78426 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-1P78426 AL021578.1-201ENST00000613646 709 ntBASIC13.27□□□□□ -0.29
NKX6-1P78426 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
NKX6-1P78426 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NKX6-1P78426 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX6-1P78426 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX6-1P78426 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NKX6-1P78426 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-1P78426 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NKX6-1P78426 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NKX6-1P78426 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 BTBD6P1-201ENST00000412176 1267 ntBASIC13.26□□□□□ -0.29
NKX6-1P78426 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX6-1P78426 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-1P78426 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-1P78426 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.26□□□□□ -0.29
NKX6-1P78426 AC022137.2-201ENST00000503482 481 ntBASIC13.26□□□□□ -0.29
NKX6-1P78426 AP001582.1-201ENST00000525856 295 ntBASIC13.26□□□□□ -0.29
NKX6-1P78426 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX6-1P78426 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-1P78426 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-1P78426 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.26□□□□□ -0.29
NKX6-1P78426 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.26□□□□□ -0.29
NKX6-1P78426 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-1P78426 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-1P78426 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-1P78426 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
NKX6-1P78426 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 AC104457.1-201ENST00000401024 814 ntBASIC13.25□□□□□ -0.29
NKX6-1P78426 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms