Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.07□□□□□ -0.16
TRA2BP62995 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
TRA2BP62995 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 BCRP2-202ENST00000447763 634 ntBASIC14.07□□□□□ -0.16
TRA2BP62995 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRA2BP62995 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.07□□□□□ -0.16
TRA2BP62995 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.07□□□□□ -0.16
TRA2BP62995 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.07□□□□□ -0.16
TRA2BP62995 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.07□□□□□ -0.16
TRA2BP62995 BCRP6-201ENST00000510112 632 ntBASIC14.07□□□□□ -0.16
TRA2BP62995 BCRP7-201ENST00000511549 544 ntBASIC14.07□□□□□ -0.16
TRA2BP62995 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRA2BP62995 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.07□□□□□ -0.16
TRA2BP62995 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.07□□□□□ -0.16
TRA2BP62995 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.07□□□□□ -0.16
TRA2BP62995 AC103988.2-201ENST00000561804 725 ntBASIC14.07□□□□□ -0.16
TRA2BP62995 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.07□□□□□ -0.16
TRA2BP62995 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.07□□□□□ -0.16
TRA2BP62995 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.07□□□□□ -0.16
TRA2BP62995 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRA2BP62995 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.07□□□□□ -0.16
TRA2BP62995 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.07□□□□□ -0.16
TRA2BP62995 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRA2BP62995 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 AC015688.4-201ENST00000580780 1647 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 COX5BP8-201ENST00000416911 349 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 CNN2P8-201ENST00000421872 913 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 NME2P1-201ENST00000426182 414 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 FAM8A4P-201ENST00000435433 1213 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.06□□□□□ -0.16
TRA2BP62995 AL391280.1-201ENST00000506969 1062 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.06□□□□□ -0.16
TRA2BP62995 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.06□□□□□ -0.16
TRA2BP62995 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRA2BP62995 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRA2BP62995 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 GRK6P1-201ENST00000400595 1711 ntBASIC14.06□□□□□ -0.16
TRA2BP62995 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.06□□□□□ -0.16
TRA2BP62995 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRA2BP62995 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.06□□□□□ -0.16
TRA2BP62995 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRA2BP62995 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRA2BP62995 HSPA7-201ENST00000445535 1927 ntBASIC14.05□□□□□ -0.16
TRA2BP62995 AC097359.2-201ENST00000604992 2389 ntBASIC14.05□□□□□ -0.16
TRA2BP62995 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRA2BP62995 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRA2BP62995 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRA2BP62995 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRA2BP62995 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRA2BP62995 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRA2BP62995 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRA2BP62995 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms