Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 MTX1P1-201ENST00000440904 838 ntBASIC17.16■□□□□ 0.34
CHMP4BP1P59074 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 AP006547.1-201ENST00000563435 692 ntBASIC17.16■□□□□ 0.34
CHMP4BP1P59074 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 AC104982.3-201ENST00000581995 514 ntBASIC17.16■□□□□ 0.34
CHMP4BP1P59074 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.16■□□□□ 0.34
CHMP4BP1P59074 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 KRT8P13-201ENST00000463294 1010 ntBASIC17.15■□□□□ 0.34
CHMP4BP1P59074 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.15■□□□□ 0.34
CHMP4BP1P59074 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP4BP1P59074 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHMP4BP1P59074 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHMP4BP1P59074 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 OR2I1P-210ENST00000642037 4691 ntBASIC17.14■□□□□ 0.33
CHMP4BP1P59074 AGAP7P-201ENST00000582299 2062 ntBASIC17.14■□□□□ 0.33
CHMP4BP1P59074 AGAP14-201ENST00000624701 2060 ntBASIC17.14■□□□□ 0.33
CHMP4BP1P59074 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 PCDHA3-202ENST00000532566 4594 ntBASIC17.14■□□□□ 0.33
CHMP4BP1P59074 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP4BP1P59074 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms