Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN2P57739 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN2P57739 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN2P57739 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLDN2P57739 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN2P57739 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.69□□□□□ -0.06
CLDN2P57739 UPF3AP2-201ENST00000457924 1132 ntBASIC14.69□□□□□ -0.06
CLDN2P57739 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CLDN2P57739 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.69□□□□□ -0.06
CLDN2P57739 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.69□□□□□ -0.06
CLDN2P57739 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.69□□□□□ -0.06
CLDN2P57739 AC008805.1-201ENST00000590892 364 ntBASIC14.69□□□□□ -0.06
CLDN2P57739 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CLDN2P57739 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 AC008132.1-202ENST00000342005 1389 ntBASIC14.69□□□□□ -0.06
CLDN2P57739 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 AL109954.1-202ENST00000564051 2148 ntBASIC14.69□□□□□ -0.06
CLDN2P57739 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN2P57739 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN2P57739 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN2P57739 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN2P57739 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 AL008718.2-201ENST00000609206 1313 ntBASIC14.68□□□□□ -0.06
CLDN2P57739 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 MBLAC2-202ENST00000514906 1936 ntBASIC14.68□□□□□ -0.06
CLDN2P57739 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN2P57739 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN2P57739 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 ACE3P-201ENST00000423435 1973 ntBASIC14.68□□□□□ -0.06
CLDN2P57739 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN2P57739 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CLDN2P57739 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN2P57739 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN2P57739 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN2P57739 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 IMP3P2-201ENST00000489760 475 ntBASIC14.68□□□□□ -0.06
CLDN2P57739 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN2P57739 AC245884.6-201ENST00000515672 1067 ntBASIC14.68□□□□□ -0.06
CLDN2P57739 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.68□□□□□ -0.06
CLDN2P57739 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLDN2P57739 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms