Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 TCAF1P1-201ENST00000414990 2232 ntBASIC13.36□□□□□ -0.27
SRP9P49458 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.36□□□□□ -0.27
SRP9P49458 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 MRPS18AP1-201ENST00000414458 589 ntBASIC13.36□□□□□ -0.27
SRP9P49458 MEP1AP4-201ENST00000423244 1087 ntBASIC13.36□□□□□ -0.27
SRP9P49458 HMGN1P19-201ENST00000436976 333 ntBASIC13.36□□□□□ -0.27
SRP9P49458 RPL13P2-201ENST00000440687 659 ntBASIC13.36□□□□□ -0.27
SRP9P49458 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.36□□□□□ -0.27
SRP9P49458 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.36□□□□□ -0.27
SRP9P49458 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 AC092337.1-201ENST00000568699 1129 ntBASIC13.36□□□□□ -0.27
SRP9P49458 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.36□□□□□ -0.27
SRP9P49458 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.36□□□□□ -0.27
SRP9P49458 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SRP9P49458 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 AC092364.2-202ENST00000597012 1073 ntBASIC13.36□□□□□ -0.27
SRP9P49458 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.36□□□□□ -0.27
SRP9P49458 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.36□□□□□ -0.27
SRP9P49458 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.36□□□□□ -0.27
SRP9P49458 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.36□□□□□ -0.27
SRP9P49458 AC004840.1-201ENST00000636359 365 ntBASIC13.36□□□□□ -0.27
SRP9P49458 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SRP9P49458 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SRP9P49458 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SRP9P49458 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRP9P49458 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 Z82170.1-201ENST00000625081 3192 ntBASIC13.35□□□□□ -0.27
SRP9P49458 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.35□□□□□ -0.27
SRP9P49458 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.35□□□□□ -0.27
SRP9P49458 MEIS3P1-201ENST00000495167 958 ntBASIC13.35□□□□□ -0.27
SRP9P49458 DOC2GP-202ENST00000514950 1163 ntBASIC13.35□□□□□ -0.27
SRP9P49458 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.35□□□□□ -0.27
SRP9P49458 AC104794.3-201ENST00000566840 1248 ntBASIC13.35□□□□□ -0.27
SRP9P49458 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms