Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 AP000593.2-201ENST00000542775 1433 ntBASIC13.53□□□□□ -0.24
APOBEC1P41238 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
APOBEC1P41238 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.53□□□□□ -0.24
APOBEC1P41238 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
APOBEC1P41238 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.53□□□□□ -0.24
APOBEC1P41238 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOBEC1P41238 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOBEC1P41238 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOBEC1P41238 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.52□□□□□ -0.24
APOBEC1P41238 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
APOBEC1P41238 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOBEC1P41238 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.52□□□□□ -0.24
APOBEC1P41238 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
APOBEC1P41238 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOBEC1P41238 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOBEC1P41238 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOBEC1P41238 RN7SKP230-201ENST00000365642 335 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
APOBEC1P41238 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
APOBEC1P41238 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.52□□□□□ -0.25
APOBEC1P41238 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 ARSEP1-201ENST00000420443 635 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 FAM197Y7-201ENST00000432892 766 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 FAM8A4P-201ENST00000435433 1213 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.52□□□□□ -0.25
APOBEC1P41238 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOBEC1P41238 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.52□□□□□ -0.25
APOBEC1P41238 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.52□□□□□ -0.25
APOBEC1P41238 AC131206.1-201ENST00000538078 1211 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 KRT90P-201ENST00000549264 1064 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.52□□□□□ -0.25
APOBEC1P41238 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 ECM1P1-201ENST00000604092 1279 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.52□□□□□ -0.25
APOBEC1P41238 AC006453.4-201ENST00000636949 1252 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.52□□□□□ -0.25
APOBEC1P41238 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APOBEC1P41238 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 AC113367.3-201ENST00000508316 1912 ntBASIC13.52□□□□□ -0.25
APOBEC1P41238 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOBEC1P41238 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APOBEC1P41238 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
APOBEC1P41238 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOBEC1P41238 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.51□□□□□ -0.25
APOBEC1P41238 AC092135.3-201ENST00000624151 1846 ntBASIC13.51□□□□□ -0.25
APOBEC1P41238 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
APOBEC1P41238 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOBEC1P41238 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOBEC1P41238 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms