Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.67■□□□□ 0.58
COL15A1P39059 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL15A1P39059 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL15A1P39059 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.67■□□□□ 0.58
COL15A1P39059 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.67■□□□□ 0.58
COL15A1P39059 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.67■□□□□ 0.58
COL15A1P39059 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.67■□□□□ 0.58
COL15A1P39059 RPL18AP3-201ENST00000462885 528 ntBASIC18.67■□□□□ 0.58
COL15A1P39059 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.67■□□□□ 0.58
COL15A1P39059 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.67■□□□□ 0.58
COL15A1P39059 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.67■□□□□ 0.58
COL15A1P39059 IGHV3-37-201ENST00000518544 340 ntBASIC18.67■□□□□ 0.58
COL15A1P39059 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.67■□□□□ 0.58
COL15A1P39059 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.67■□□□□ 0.58
COL15A1P39059 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COL15A1P39059 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.67■□□□□ 0.58
COL15A1P39059 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.67■□□□□ 0.58
COL15A1P39059 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL15A1P39059 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.67■□□□□ 0.58
COL15A1P39059 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL15A1P39059 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL15A1P39059 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.66■□□□□ 0.58
COL15A1P39059 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.66■□□□□ 0.58
COL15A1P39059 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.66■□□□□ 0.58
COL15A1P39059 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.66■□□□□ 0.58
COL15A1P39059 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL15A1P39059 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL15A1P39059 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.66■□□□□ 0.58
COL15A1P39059 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.66■□□□□ 0.58
COL15A1P39059 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL15A1P39059 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COL15A1P39059 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.66■□□□□ 0.58
COL15A1P39059 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 AC130709.1-201ENST00000484779 1212 ntBASIC18.66■□□□□ 0.58
COL15A1P39059 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL15A1P39059 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
COL15A1P39059 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.66■□□□□ 0.58
COL15A1P39059 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL15A1P39059 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.65■□□□□ 0.58
COL15A1P39059 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.65■□□□□ 0.58
COL15A1P39059 KRT8P31-201ENST00000504812 1408 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL15A1P39059 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.65■□□□□ 0.58
COL15A1P39059 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.65■□□□□ 0.58
COL15A1P39059 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 KRT18P9-201ENST00000604826 1300 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.65■□□□□ 0.58
COL15A1P39059 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.65■□□□□ 0.58
COL15A1P39059 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL15A1P39059 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 AL592076.1-201ENST00000424448 303 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 DUTP3-201ENST00000450025 415 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.65■□□□□ 0.58
COL15A1P39059 AC093752.3-201ENST00000567343 901 ntBASIC18.65■□□□□ 0.58
COL15A1P39059 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.65■□□□□ 0.58
COL15A1P39059 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms