Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 GK-202ENST00000378941 458 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGCLP35914 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 AC099336.1-201ENST00000417053 1171 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 PUDPP3-201ENST00000445368 636 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 CHMP1AP1-201ENST00000445563 662 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 KRT223P-202ENST00000449164 1292 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 HOMER2P2-201ENST00000451621 847 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 DUX4L45-201ENST00000566406 1057 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HMGCLP35914 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 AP001002.3-201ENST00000623482 206 ntBASIC14.84□□□□□ -0.03
HMGCLP35914 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCLP35914 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCLP35914 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HMGCLP35914 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCLP35914 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCLP35914 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HMGCLP35914 KRT8P4-201ENST00000509735 1454 ntBASIC14.83□□□□□ -0.03
HMGCLP35914 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCLP35914 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HMGCLP35914 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCLP35914 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 INTS4P1-203ENST00000641008 3683 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 MIR658-201ENST00000385210 100 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HMGCLP35914 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 ATP5G2P4-201ENST00000442175 420 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 TPT1P11-201ENST00000458482 498 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGCLP35914 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGCLP35914 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGCLP35914 MIR4683-201ENST00000579659 81 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 PPY2P-201ENST00000582808 702 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 MIR4259-201ENST00000584466 101 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 AC008825.2-201ENST00000603374 718 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.83□□□□□ -0.04
HMGCLP35914 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGCLP35914 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 FAM45BP-202ENST00000592932 1624 ntBASIC14.83□□□□□ -0.04
HMGCLP35914 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
HMGCLP35914 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCLP35914 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCLP35914 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMGCLP35914 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGCLP35914 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCLP35914 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCLP35914 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCLP35914 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms