Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.32□□□□□ -0.28
CD40LGP29965 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.32□□□□□ -0.28
CD40LGP29965 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 AC117500.6-201ENST00000624871 588 ntBASIC13.32□□□□□ -0.28
CD40LGP29965 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CD40LGP29965 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CD40LGP29965 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CD40LGP29965 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CD40LGP29965 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.31□□□□□ -0.28
CD40LGP29965 AC012640.2-201ENST00000561606 901 ntBASIC13.31□□□□□ -0.28
CD40LGP29965 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.31□□□□□ -0.28
CD40LGP29965 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 POM121L14P-201ENST00000406100 1558 ntBASIC13.31□□□□□ -0.28
CD40LGP29965 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.31□□□□□ -0.28
CD40LGP29965 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.31□□□□□ -0.28
CD40LGP29965 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD40LGP29965 KRT8P37-201ENST00000451609 1420 ntBASIC13.3□□□□□ -0.28
CD40LGP29965 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CD40LGP29965 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 AP000437.1-201ENST00000624057 2085 ntBASIC13.3□□□□□ -0.28
CD40LGP29965 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.3□□□□□ -0.28
CD40LGP29965 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CD40LGP29965 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CD40LGP29965 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.3□□□□□ -0.28
CD40LGP29965 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.3□□□□□ -0.28
CD40LGP29965 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.3□□□□□ -0.28
CD40LGP29965 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.3□□□□□ -0.28
CD40LGP29965 Z83851.2-201ENST00000609564 659 ntBASIC13.3□□□□□ -0.28
CD40LGP29965 AC120114.3-201ENST00000611923 658 ntBASIC13.3□□□□□ -0.28
CD40LGP29965 MIR7706-201ENST00000613747 67 ntBASIC13.3□□□□□ -0.28
CD40LGP29965 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 BX640515.1-201ENST00000617215 977 ntBASIC13.3□□□□□ -0.28
CD40LGP29965 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.3□□□□□ -0.28
CD40LGP29965 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD40LGP29965 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms