Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RXRBP28702 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 AC009093.10-201ENST00000641956 1442 ntBASIC18.99■□□□□ 0.63
RXRBP28702 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RXRBP28702 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RXRBP28702 RPL4P6-201ENST00000438116 1304 ntBASIC18.99■□□□□ 0.63
RXRBP28702 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.98■□□□□ 0.63
RXRBP28702 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RXRBP28702 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RXRBP28702 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.98■□□□□ 0.63
RXRBP28702 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 AC068880.1-201ENST00000507289 2297 ntBASIC18.98■□□□□ 0.63
RXRBP28702 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 AC069224.1-201ENST00000566372 1715 ntBASIC18.98■□□□□ 0.63
RXRBP28702 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RXRBP28702 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 AIG1-203ENST00000367596 559 ntTSL 2 BASIC18.98■□□□□ 0.63
RXRBP28702 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC18.98■□□□□ 0.63
RXRBP28702 FDPSP7-201ENST00000429043 1054 ntBASIC18.98■□□□□ 0.63
RXRBP28702 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC18.98■□□□□ 0.63
RXRBP28702 KRT18P62-201ENST00000446618 1287 ntBASIC18.98■□□□□ 0.63
RXRBP28702 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 AC007679.1-201ENST00000458609 502 ntBASIC18.98■□□□□ 0.63
RXRBP28702 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RXRBP28702 FAM86JP-202ENST00000484500 988 ntBASIC18.98■□□□□ 0.63
RXRBP28702 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC18.98■□□□□ 0.63
RXRBP28702 ABCC6P2-201ENST00000526069 590 ntBASIC18.98■□□□□ 0.63
RXRBP28702 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.98■□□□□ 0.63
RXRBP28702 BAK1P2-201ENST00000532665 631 ntBASIC18.98■□□□□ 0.63
RXRBP28702 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RXRBP28702 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
RXRBP28702 AL136982.5-201ENST00000605222 294 ntBASIC18.98■□□□□ 0.63
RXRBP28702 AL591471.1-201ENST00000621855 229 ntBASIC18.98■□□□□ 0.63
RXRBP28702 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC18.98■□□□□ 0.63
RXRBP28702 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.98■□□□□ 0.63
RXRBP28702 AC019109.1-201ENST00000401725 1874 ntBASIC18.98■□□□□ 0.63
RXRBP28702 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RXRBP28702 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.98■□□□□ 0.63
RXRBP28702 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RXRBP28702 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RXRBP28702 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 ODCP-201ENST00000459650 1639 ntBASIC18.97■□□□□ 0.63
RXRBP28702 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.97■□□□□ 0.63
RXRBP28702 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RXRBP28702 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 AC092171.3-201ENST00000610122 2651 ntBASIC18.97■□□□□ 0.63
RXRBP28702 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.97■□□□□ 0.63
RXRBP28702 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 HNRNPABP1-201ENST00000406003 734 ntBASIC18.97■□□□□ 0.63
RXRBP28702 HNRNPA3P6-201ENST00000472163 1006 ntBASIC18.97■□□□□ 0.63
RXRBP28702 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC18.97■□□□□ 0.63
RXRBP28702 ALG1L7P-201ENST00000502317 768 ntBASIC18.97■□□□□ 0.63
RXRBP28702 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 AC100858.1-201ENST00000514059 1228 ntBASIC18.97■□□□□ 0.63
RXRBP28702 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC18.97■□□□□ 0.63
RXRBP28702 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 RN7SL300P-201ENST00000582522 318 ntBASIC18.97■□□□□ 0.63
RXRBP28702 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC18.97■□□□□ 0.63
RXRBP28702 BX322562.1-201ENST00000617004 561 ntBASIC18.97■□□□□ 0.63
RXRBP28702 AC091769.1-201ENST00000619576 568 ntBASIC18.97■□□□□ 0.63
RXRBP28702 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RXRBP28702 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.97■□□□□ 0.63
RXRBP28702 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.97■□□□□ 0.63
RXRBP28702 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RXRBP28702 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms