Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ACTG1P3-201ENST00000431775 1114 ntBASIC12.57□□□□□ -0.4
LMO1P25800 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO1P25800 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.57□□□□□ -0.4
LMO1P25800 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.57□□□□□ -0.4
LMO1P25800 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO1P25800 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LMO1P25800 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO1P25800 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 AL356585.2-201ENST00000625078 2396 ntBASIC12.57□□□□□ -0.4
LMO1P25800 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.57□□□□□ -0.4
LMO1P25800 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO1P25800 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO1P25800 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.57□□□□□ -0.4
LMO1P25800 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.57□□□□□ -0.4
LMO1P25800 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LMO1P25800 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO1P25800 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO1P25800 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.56□□□□□ -0.4
LMO1P25800 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 AC007969.1-201ENST00000433675 447 ntBASIC12.56□□□□□ -0.4
LMO1P25800 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.56□□□□□ -0.4
LMO1P25800 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 AC027307.3-201ENST00000594262 1100 ntBASIC12.56□□□□□ -0.4
LMO1P25800 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 AC012645.4-201ENST00000610691 1061 ntBASIC12.56□□□□□ -0.4
LMO1P25800 AC003102.2-201ENST00000589195 1469 ntBASIC12.56□□□□□ -0.4
LMO1P25800 AGGF1P1-201ENST00000509500 2073 ntBASIC12.56□□□□□ -0.4
LMO1P25800 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
LMO1P25800 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 CICP8-201ENST00000455800 2813 ntBASIC12.56□□□□□ -0.4
LMO1P25800 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO1P25800 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO1P25800 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LMO1P25800 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LMO1P25800 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO1P25800 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LMO1P25800 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms