Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 BRD7P5-201ENST00000299197 1822 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LAMA1P25391 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 PGAM1P12-201ENST00000505622 748 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.23□□□□□ -0.13
LAMA1P25391 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 MROH4P-201ENST00000431302 1578 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.23□□□□□ -0.13
LAMA1P25391 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
LAMA1P25391 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.23□□□□□ -0.13
LAMA1P25391 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 IGHV1-12-201ENST00000518307 205 ntBASIC14.23□□□□□ -0.13
LAMA1P25391 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LAMA1P25391 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.23□□□□□ -0.13
LAMA1P25391 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.23□□□□□ -0.13
LAMA1P25391 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LAMA1P25391 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.22□□□□□ -0.13
LAMA1P25391 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 BAK1P1-201ENST00000317045 636 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 AL357373.1-201ENST00000394974 322 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 CICP12-201ENST00000455801 843 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.22□□□□□ -0.13
LAMA1P25391 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.22□□□□□ -0.13
LAMA1P25391 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LAMA1P25391 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 MIR4472-1-201ENST00000584349 80 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 AC090510.3-201ENST00000615831 821 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.22□□□□□ -0.13
LAMA1P25391 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.22□□□□□ -0.13
LAMA1P25391 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LAMA1P25391 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.22□□□□□ -0.13
LAMA1P25391 PYY2-201ENST00000315776 282 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.22□□□□□ -0.13
LAMA1P25391 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.22□□□□□ -0.13
LAMA1P25391 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LAMA1P25391 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 MRPL37P1-201ENST00000592451 1337 ntBASIC14.22□□□□□ -0.13
LAMA1P25391 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LAMA1P25391 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.21□□□□□ -0.13
LAMA1P25391 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 RN7SKP109-201ENST00000410592 316 ntBASIC14.21□□□□□ -0.13
LAMA1P25391 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.21□□□□□ -0.13
LAMA1P25391 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.21□□□□□ -0.13
LAMA1P25391 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.21□□□□□ -0.13
LAMA1P25391 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 ACE3P-201ENST00000423435 1973 ntBASIC14.21□□□□□ -0.13
LAMA1P25391 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.21□□□□□ -0.13
LAMA1P25391 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.21□□□□□ -0.13
LAMA1P25391 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.21□□□□□ -0.13
LAMA1P25391 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 OR8T1P-201ENST00000421347 918 ntBASIC14.21□□□□□ -0.13
LAMA1P25391 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.21□□□□□ -0.13
LAMA1P25391 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LAMA1P25391 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms