Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.85□□□□□ -0.35
TNFSF4P23510 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 AP005482.1-201ENST00000563722 1273 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.85□□□□□ -0.35
TNFSF4P23510 DUX4L47-201ENST00000566374 394 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 AC138951.2-201ENST00000623455 1161 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 AL009178.2-201ENST00000597278 2719 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 AC013268.4-201ENST00000637413 2228 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TNFSF4P23510 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TNFSF4P23510 AC144831.1-201ENST00000573312 2656 ntBASIC12.85□□□□□ -0.35
TNFSF4P23510 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
TNFSF4P23510 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 REXO1L2P-201ENST00000425429 2069 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 PDIA3P1-201ENST00000471856 1510 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 EIF3FP3-201ENST00000434851 1086 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 RPL7P3-201ENST00000441388 714 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.84□□□□□ -0.35
TNFSF4P23510 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.84□□□□□ -0.35
TNFSF4P23510 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TNFSF4P23510 HILS1-202ENST00000545329 423 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 KRT90P-201ENST00000549264 1064 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.84□□□□□ -0.35
TNFSF4P23510 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.84□□□□□ -0.35
TNFSF4P23510 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.84□□□□□ -0.35
TNFSF4P23510 RHOXF1P1-202ENST00000635473 501 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.84□□□□□ -0.35
TNFSF4P23510 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.84□□□□□ -0.35
TNFSF4P23510 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.84□□□□□ -0.35
TNFSF4P23510 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TNFSF4P23510 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TNFSF4P23510 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
TNFSF4P23510 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.83□□□□□ -0.35
TNFSF4P23510 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TNFSF4P23510 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
TNFSF4P23510 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.83□□□□□ -0.35
TNFSF4P23510 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TNFSF4P23510 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TNFSF4P23510 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TNFSF4P23510 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
TNFSF4P23510 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
TNFSF4P23510 AL138709.1-201ENST00000614840 1693 ntBASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms