Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
BCKDHAP12694 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 SOCS2P1-201ENST00000417727 557 ntBASIC14.31□□□□□ -0.12
BCKDHAP12694 AC098850.1-201ENST00000419919 790 ntBASIC14.31□□□□□ -0.12
BCKDHAP12694 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.31□□□□□ -0.12
BCKDHAP12694 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BCKDHAP12694 SPTLC1P1-201ENST00000447199 261 ntBASIC14.31□□□□□ -0.12
BCKDHAP12694 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
BCKDHAP12694 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.31□□□□□ -0.12
BCKDHAP12694 GIMAP3P-201ENST00000495150 836 ntBASIC14.31□□□□□ -0.12
BCKDHAP12694 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.31□□□□□ -0.12
BCKDHAP12694 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.31□□□□□ -0.12
BCKDHAP12694 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.31□□□□□ -0.12
BCKDHAP12694 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 SALL4P5-201ENST00000419001 1760 ntBASIC14.31□□□□□ -0.12
BCKDHAP12694 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
BCKDHAP12694 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
BCKDHAP12694 AC067750.1-201ENST00000608826 6545 ntBASIC14.31□□□□□ -0.12
BCKDHAP12694 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BCKDHAP12694 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
BCKDHAP12694 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.3□□□□□ -0.12
BCKDHAP12694 DFFBP1-201ENST00000433250 979 ntBASIC14.3□□□□□ -0.12
BCKDHAP12694 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.3□□□□□ -0.12
BCKDHAP12694 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 UGT1A2P-201ENST00000454886 866 ntBASIC14.3□□□□□ -0.12
BCKDHAP12694 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 RNA5SP421-201ENST00000516864 134 ntBASIC14.3□□□□□ -0.12
BCKDHAP12694 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
BCKDHAP12694 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.3□□□□□ -0.12
BCKDHAP12694 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 AC123567.1-201ENST00000548294 1261 ntBASIC14.3□□□□□ -0.12
BCKDHAP12694 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.3□□□□□ -0.12
BCKDHAP12694 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BCKDHAP12694 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.3□□□□□ -0.12
BCKDHAP12694 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BCKDHAP12694 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BCKDHAP12694 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms