Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.23■□□□□ 0.67
MS4A1P11836 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.23■□□□□ 0.67
MS4A1P11836 AC002472.2-201ENST00000442739 958 ntBASIC19.23■□□□□ 0.67
MS4A1P11836 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 TPT1P11-201ENST00000458482 498 ntBASIC19.23■□□□□ 0.67
MS4A1P11836 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.23■□□□□ 0.67
MS4A1P11836 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 AC140912.1-201ENST00000577171 1054 ntBASIC19.23■□□□□ 0.67
MS4A1P11836 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 AC005252.2-201ENST00000624630 1141 ntBASIC19.23■□□□□ 0.67
MS4A1P11836 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 AC067750.1-201ENST00000608826 6545 ntBASIC19.23■□□□□ 0.67
MS4A1P11836 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.23■□□□□ 0.67
MS4A1P11836 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A1P11836 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A1P11836 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A1P11836 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC19.22■□□□□ 0.67
MS4A1P11836 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC19.22■□□□□ 0.67
MS4A1P11836 AC055811.4-201ENST00000624039 1754 ntBASIC19.22■□□□□ 0.67
MS4A1P11836 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC19.22■□□□□ 0.67
MS4A1P11836 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MS4A1P11836 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
MS4A1P11836 TLE1P1-201ENST00000422965 589 ntBASIC19.22■□□□□ 0.67
MS4A1P11836 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.22■□□□□ 0.67
MS4A1P11836 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.22■□□□□ 0.67
MS4A1P11836 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A1P11836 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.22■□□□□ 0.67
MS4A1P11836 AC009486.1-201ENST00000569860 813 ntBASIC19.22■□□□□ 0.67
MS4A1P11836 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.22■□□□□ 0.67
MS4A1P11836 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MS4A1P11836 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MS4A1P11836 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
MS4A1P11836 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A1P11836 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MS4A1P11836 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MS4A1P11836 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 MIR661-201ENST00000384842 89 ntBASIC19.21■□□□□ 0.67
MS4A1P11836 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A1P11836 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A1P11836 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.21■□□□□ 0.67
MS4A1P11836 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A1P11836 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MS4A1P11836 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms