Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
THBS1P07996 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
THBS1P07996 AC098614.1-201ENST00000368528 745 ntBASIC13.79□□□□□ -0.2
THBS1P07996 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
THBS1P07996 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.79□□□□□ -0.2
THBS1P07996 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.79□□□□□ -0.2
THBS1P07996 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.79□□□□□ -0.2
THBS1P07996 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 CTBP2P3-201ENST00000585629 1255 ntBASIC13.79□□□□□ -0.2
THBS1P07996 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
THBS1P07996 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
THBS1P07996 WFDC1-204ENST00000613603 549 ntBASIC13.79□□□□□ -0.2
THBS1P07996 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
THBS1P07996 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
THBS1P07996 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
THBS1P07996 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
THBS1P07996 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 AC092135.3-201ENST00000624151 1846 ntBASIC13.78□□□□□ -0.2
THBS1P07996 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 AC152010.1-201ENST00000415779 2006 ntBASIC13.78□□□□□ -0.2
THBS1P07996 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
THBS1P07996 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 AC131206.1-201ENST00000538078 1211 ntBASIC13.78□□□□□ -0.2
THBS1P07996 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 AL359881.2-201ENST00000602973 570 ntBASIC13.78□□□□□ -0.2
THBS1P07996 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
THBS1P07996 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 AL138725.1-201ENST00000407347 1314 ntBASIC13.78□□□□□ -0.2
THBS1P07996 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
THBS1P07996 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.78□□□□□ -0.2
THBS1P07996 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.78□□□□□ -0.2
THBS1P07996 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
THBS1P07996 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
THBS1P07996 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
THBS1P07996 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
THBS1P07996 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
THBS1P07996 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.77□□□□□ -0.2
THBS1P07996 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms