Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 AC003102.2-201ENST00000589195 1469 ntBASIC13.65□□□□□ -0.22
P04436 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
P04436 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.65□□□□□ -0.22
P04436 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 ACE3P-201ENST00000423435 1973 ntBASIC13.65□□□□□ -0.22
P04436 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 AC023157.3-201ENST00000619086 2088 ntBASIC13.65□□□□□ -0.22
P04436 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.65□□□□□ -0.22
P04436 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.65□□□□□ -0.22
P04436 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P04436 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.65□□□□□ -0.23
P04436 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.64□□□□□ -0.23
P04436 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.64□□□□□ -0.23
P04436 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.64□□□□□ -0.23
P04436 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
P04436 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
P04436 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P04436 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 AC091951.1-201ENST00000512854 2465 ntBASIC13.64□□□□□ -0.23
P04436 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.64□□□□□ -0.23
P04436 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.64□□□□□ -0.23
P04436 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 RN7SKP230-201ENST00000365642 335 ntBASIC13.64□□□□□ -0.23
P04436 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
P04436 MIR663B-201ENST00000408361 115 ntBASIC13.64□□□□□ -0.23
P04436 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.64□□□□□ -0.23
P04436 POM121L10P-201ENST00000436994 1285 ntBASIC13.64□□□□□ -0.23
P04436 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.64□□□□□ -0.23
P04436 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 AC100850.1-201ENST00000506768 649 ntBASIC13.64□□□□□ -0.23
P04436 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.64□□□□□ -0.23
P04436 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.64□□□□□ -0.23
P04436 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
P04436 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.64□□□□□ -0.23
P04436 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
P04436 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
P04436 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
P04436 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.64□□□□□ -0.23
P04436 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
P04436 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.64□□□□□ -0.23
P04436 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
P04436 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.64□□□□□ -0.23
P04436 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
P04436 AC092053.3-201ENST00000641308 4975 ntBASIC13.63□□□□□ -0.23
P04436 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.63□□□□□ -0.23
P04436 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.63□□□□□ -0.23
P04436 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
P04436 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
P04436 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 AC020907.1-201ENST00000616460 1350 ntBASIC13.63□□□□□ -0.23
P04436 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.63□□□□□ -0.23
P04436 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.63□□□□□ -0.23
P04436 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.63□□□□□ -0.23
P04436 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
P04436 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.63□□□□□ -0.23
P04436 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.63□□□□□ -0.23
P04436 AC006033.1-201ENST00000440505 426 ntBASIC13.63□□□□□ -0.23
P04436 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.63□□□□□ -0.23
P04436 AC021723.1-201ENST00000486306 515 ntBASIC13.63□□□□□ -0.23
P04436 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P04436 AP001258.2-201ENST00000529891 490 ntBASIC13.63□□□□□ -0.23
P04436 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.63□□□□□ -0.23
P04436 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.63□□□□□ -0.23
P04436 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.63□□□□□ -0.23
P04436 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms