Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DRAP01903 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 COX5BP1-201ENST00000507622 393 ntBASIC16.05■□□□□ 0.16
HLA-DRAP01903 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DRAP01903 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 MIR4683-201ENST00000579659 81 ntBASIC16.05■□□□□ 0.16
HLA-DRAP01903 RN7SL713P-201ENST00000582127 302 ntBASIC16.05■□□□□ 0.16
HLA-DRAP01903 AC239800.4-201ENST00000603712 296 ntBASIC16.05■□□□□ 0.16
HLA-DRAP01903 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DRAP01903 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DRAP01903 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DRAP01903 AC092135.3-201ENST00000624151 1846 ntBASIC16.05■□□□□ 0.16
HLA-DRAP01903 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DRAP01903 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 MRPL37P1-201ENST00000592451 1337 ntBASIC16.04■□□□□ 0.16
HLA-DRAP01903 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AC022210.1-201ENST00000449856 793 ntBASIC16.04■□□□□ 0.16
HLA-DRAP01903 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AC119751.2-201ENST00000504529 210 ntBASIC16.04■□□□□ 0.16
HLA-DRAP01903 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AP001267.2-201ENST00000532619 2086 ntBASIC16.04■□□□□ 0.16
HLA-DRAP01903 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HLA-DRAP01903 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DRAP01903 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 AC015656.1-201ENST00000624209 3578 ntBASIC16.03■□□□□ 0.16
HLA-DRAP01903 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 C2orf69P2-201ENST00000562032 1123 ntBASIC16.03■□□□□ 0.16
HLA-DRAP01903 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms