Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LTAP01374 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.29□□□□□ -0.6
LTAP01374 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.29□□□□□ -0.6
LTAP01374 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 AC020658.7-201ENST00000624274 2442 ntBASIC11.28□□□□□ -0.6
LTAP01374 AC090643.2-201ENST00000623442 2029 ntBASIC11.28□□□□□ -0.6
LTAP01374 AC215219.1-201ENST00000400706 1817 ntBASIC11.28□□□□□ -0.6
LTAP01374 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.28□□□□□ -0.6
LTAP01374 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.28□□□□□ -0.6
LTAP01374 KRT8P14-201ENST00000414254 1442 ntBASIC11.28□□□□□ -0.6
LTAP01374 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
LTAP01374 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.28□□□□□ -0.6
LTAP01374 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.28□□□□□ -0.6
LTAP01374 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 AL589739.1-201ENST00000607720 493 ntBASIC11.28□□□□□ -0.6
LTAP01374 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 CETN4P-206ENST00000642099 2168 ntBASIC11.28□□□□□ -0.6
LTAP01374 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.28□□□□□ -0.6
LTAP01374 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 NUTM2HP-201ENST00000442076 2498 ntBASIC11.28□□□□□ -0.6
LTAP01374 AC111170.3-201ENST00000624282 2464 ntBASIC11.28□□□□□ -0.6
LTAP01374 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LTAP01374 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LTAP01374 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LTAP01374 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.6
LTAP01374 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.27□□□□□ -0.6
LTAP01374 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.27□□□□□ -0.6
LTAP01374 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.27□□□□□ -0.6
LTAP01374 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LTAP01374 CLK3P2-201ENST00000427566 1453 ntBASIC11.27□□□□□ -0.6
LTAP01374 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
LTAP01374 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LTAP01374 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 AL645937.2-201ENST00000396808 931 ntBASIC11.27□□□□□ -0.61
LTAP01374 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.27□□□□□ -0.61
LTAP01374 MCCD1P2-201ENST00000423228 335 ntBASIC11.27□□□□□ -0.61
LTAP01374 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.27□□□□□ -0.61
LTAP01374 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LTAP01374 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.27□□□□□ -0.61
LTAP01374 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.27□□□□□ -0.61
LTAP01374 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.27□□□□□ -0.61
LTAP01374 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.27□□□□□ -0.61
LTAP01374 AC092364.2-202ENST00000597012 1073 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms