Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRCH4O75427 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LRCH4O75427 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
LRCH4O75427 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.52■□□□□ 0.08
LRCH4O75427 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
LRCH4O75427 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH4O75427 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.52■□□□□ 0.08
LRCH4O75427 AL590640.2-201ENST00000457038 527 ntBASIC15.52■□□□□ 0.08
LRCH4O75427 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCH4O75427 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRCH4O75427 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRCH4O75427 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH4O75427 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCH4O75427 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCH4O75427 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
LRCH4O75427 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH4O75427 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LRCH4O75427 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH4O75427 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH4O75427 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH4O75427 MYADML-201ENST00000474610 2147 ntBASIC15.52■□□□□ 0.07
LRCH4O75427 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH4O75427 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRCH4O75427 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH4O75427 MYO15B-237ENST00000642007 4893 ntBASIC15.51■□□□□ 0.07
LRCH4O75427 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH4O75427 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH4O75427 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
LRCH4O75427 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.51■□□□□ 0.07
LRCH4O75427 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.51■□□□□ 0.07
LRCH4O75427 AP003171.2-201ENST00000528208 925 ntBASIC15.51■□□□□ 0.07
LRCH4O75427 AC106820.3-201ENST00000561653 397 ntBASIC15.51■□□□□ 0.07
LRCH4O75427 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH4O75427 AP001002.3-201ENST00000623482 206 ntBASIC15.51■□□□□ 0.07
LRCH4O75427 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.51■□□□□ 0.07
LRCH4O75427 AL358472.5-202ENST00000641448 1267 ntBASIC15.51■□□□□ 0.07
LRCH4O75427 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH4O75427 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRCH4O75427 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH4O75427 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRCH4O75427 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
LRCH4O75427 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
LRCH4O75427 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCH4O75427 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LRCH4O75427 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.5■□□□□ 0.07
LRCH4O75427 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 TPM3P8-201ENST00000330554 643 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 RN7SKP175-201ENST00000408472 289 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 FTH1P14-201ENST00000482930 551 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.5■□□□□ 0.07
LRCH4O75427 RNA5SP486-201ENST00000515961 83 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.5■□□□□ 0.07
LRCH4O75427 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.5■□□□□ 0.07
LRCH4O75427 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.5■□□□□ 0.07
LRCH4O75427 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.5■□□□□ 0.07
LRCH4O75427 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRCH4O75427 BTNL10-201ENST00000595971 695 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 AL022328.1-201ENST00000610050 478 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 AC012645.4-201ENST00000610691 1061 ntBASIC15.5■□□□□ 0.07
LRCH4O75427 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms