Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 AC004461.1-201ENST00000412461 403 ntBASIC15.16■□□□□ 0.02
CDH16O75309 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH16O75309 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH16O75309 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH16O75309 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH16O75309 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH16O75309 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CDH16O75309 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 AC093525.8-201ENST00000624099 1342 ntBASIC15.16■□□□□ 0.02
CDH16O75309 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.16■□□□□ 0.02
CDH16O75309 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH16O75309 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH16O75309 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH16O75309 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 RPL37AP1-201ENST00000412502 279 ntBASIC15.15■□□□□ 0.02
CDH16O75309 SPDYE7P-202ENST00000420373 878 ntBASIC15.15■□□□□ 0.02
CDH16O75309 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH16O75309 GAPDHP40-201ENST00000505218 1006 ntBASIC15.15■□□□□ 0.02
CDH16O75309 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH16O75309 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH16O75309 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH16O75309 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH16O75309 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDH16O75309 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH16O75309 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 AC004461.2-201ENST00000629517 803 ntBASIC15.15■□□□□ 0.02
CDH16O75309 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 CICP20-201ENST00000443330 2801 ntBASIC15.15■□□□□ 0.02
CDH16O75309 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms