Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COCHO43405 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COCHO43405 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
COCHO43405 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COCHO43405 AC136759.1-202ENST00000530858 2194 ntBASIC15.34■□□□□ 0.05
COCHO43405 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
COCHO43405 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.33■□□□□ 0.05
COCHO43405 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COCHO43405 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.33■□□□□ 0.05
COCHO43405 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
COCHO43405 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COCHO43405 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COCHO43405 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.33■□□□□ 0.05
COCHO43405 AC144831.1-201ENST00000573312 2656 ntBASIC15.33■□□□□ 0.05
COCHO43405 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.33■□□□□ 0.05
COCHO43405 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COCHO43405 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.33■□□□□ 0.04
COCHO43405 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.33■□□□□ 0.04
COCHO43405 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.33■□□□□ 0.04
COCHO43405 RN7SL774P-201ENST00000577467 290 ntBASIC15.33■□□□□ 0.04
COCHO43405 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.33■□□□□ 0.04
COCHO43405 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COCHO43405 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COCHO43405 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 FAM90A7P-201ENST00000382628 1395 ntBASIC15.33■□□□□ 0.04
COCHO43405 FAM90A23P-201ENST00000400136 1395 ntBASIC15.33■□□□□ 0.04
COCHO43405 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COCHO43405 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COCHO43405 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.33■□□□□ 0.04
COCHO43405 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.33■□□□□ 0.04
COCHO43405 AC018529.2-202ENST00000611482 3087 ntBASIC15.32■□□□□ 0.04
COCHO43405 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 MIR769-201ENST00000390225 118 ntBASIC15.32■□□□□ 0.04
COCHO43405 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.32■□□□□ 0.04
COCHO43405 AL008707.1-201ENST00000422498 534 ntBASIC15.32■□□□□ 0.04
COCHO43405 AC125604.1-201ENST00000496255 707 ntBASIC15.32■□□□□ 0.04
COCHO43405 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
COCHO43405 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.32■□□□□ 0.04
COCHO43405 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.32■□□□□ 0.04
COCHO43405 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.32■□□□□ 0.04
COCHO43405 AL132994.2-201ENST00000603120 687 ntBASIC15.32■□□□□ 0.04
COCHO43405 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.32■□□□□ 0.04
COCHO43405 AC091544.8-201ENST00000619490 361 ntBASIC15.32■□□□□ 0.04
COCHO43405 AC100757.4-201ENST00000626934 759 ntBASIC15.32■□□□□ 0.04
COCHO43405 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 AL805961.1-203ENST00000641078 1258 ntBASIC15.32■□□□□ 0.04
COCHO43405 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COCHO43405 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.32■□□□□ 0.04
COCHO43405 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 AL590440.2-201ENST00000641973 1595 ntBASIC15.32■□□□□ 0.04
COCHO43405 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.32■□□□□ 0.04
COCHO43405 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms