Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM38O00635 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM38O00635 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM38O00635 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM38O00635 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM38O00635 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM38O00635 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM38O00635 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM38O00635 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM38O00635 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM38O00635 KRT18P25-201ENST00000508931 1278 ntBASIC15.11■□□□□ 0.01
TRIM38O00635 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM38O00635 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.11■□□□□ 0.01
TRIM38O00635 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM38O00635 AC138951.2-201ENST00000623455 1161 ntBASIC15.11■□□□□ 0.01
TRIM38O00635 AC068587.10-201ENST00000641210 219 ntBASIC15.11■□□□□ 0.01
TRIM38O00635 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 AL138799.1-201ENST00000448213 1675 ntBASIC15.11■□□□□ 0.01
TRIM38O00635 AL138709.1-201ENST00000614840 1693 ntBASIC15.11■□□□□ 0.01
TRIM38O00635 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM38O00635 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM38O00635 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM38O00635 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM38O00635 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM38O00635 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM38O00635 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM38O00635 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM38O00635 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.1■□□□□ 0.01
TRIM38O00635 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.1■□□□□ 0.01
TRIM38O00635 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 AL139099.5-201ENST00000635274 300 ntBASIC15.1■□□□□ 0.01
TRIM38O00635 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.1■□□□□ 0.01
TRIM38O00635 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM38O00635 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM38O00635 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM38O00635 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms