Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.93□□□□□ -0.18
NTN3O00634 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.93□□□□□ -0.18
NTN3O00634 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
NTN3O00634 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.93□□□□□ -0.18
NTN3O00634 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.93□□□□□ -0.18
NTN3O00634 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NTN3O00634 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.92□□□□□ -0.18
NTN3O00634 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.92□□□□□ -0.18
NTN3O00634 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NTN3O00634 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
NTN3O00634 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.92□□□□□ -0.18
NTN3O00634 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.92□□□□□ -0.18
NTN3O00634 MRPL22P1-201ENST00000505398 616 ntBASIC13.92□□□□□ -0.18
NTN3O00634 IGHV3-37-201ENST00000518544 340 ntBASIC13.92□□□□□ -0.18
NTN3O00634 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.92□□□□□ -0.18
NTN3O00634 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.92□□□□□ -0.18
NTN3O00634 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NTN3O00634 AC084781.1-201ENST00000613737 656 ntBASIC13.92□□□□□ -0.18
NTN3O00634 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 AC025262.2-201ENST00000623975 1056 ntBASIC13.92□□□□□ -0.18
NTN3O00634 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 AC006504.5-208ENST00000588784 2401 ntBASIC13.92□□□□□ -0.18
NTN3O00634 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.92□□□□□ -0.18
NTN3O00634 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NTN3O00634 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
NTN3O00634 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.91□□□□□ -0.18
NTN3O00634 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.91□□□□□ -0.18
NTN3O00634 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NTN3O00634 KRT17P5-201ENST00000332088 839 ntBASIC13.91□□□□□ -0.18
NTN3O00634 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 AL627389.1-201ENST00000413508 1182 ntBASIC13.91□□□□□ -0.18
NTN3O00634 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.91□□□□□ -0.18
NTN3O00634 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 TMCO5B-205ENST00000530020 894 ntBASIC13.91□□□□□ -0.18
NTN3O00634 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 KRT8P1-201ENST00000557533 1207 ntBASIC13.91□□□□□ -0.18
NTN3O00634 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.91□□□□□ -0.18
NTN3O00634 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.91□□□□□ -0.18
NTN3O00634 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.91□□□□□ -0.18
NTN3O00634 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 MIR6858-201ENST00000620733 67 ntBASIC13.91□□□□□ -0.18
NTN3O00634 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.91□□□□□ -0.18
NTN3O00634 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NTN3O00634 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NTN3O00634 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.91□□□□□ -0.18
NTN3O00634 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms