Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NINLQ9Y2I6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 RN7SL555P-201ENST00000584742 339 ntBASIC20.22■□□□□ 0.83
NINLQ9Y2I6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 MIR6756-201ENST00000616240 63 ntBASIC20.22■□□□□ 0.83
NINLQ9Y2I6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.22■□□□□ 0.83
NINLQ9Y2I6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 CICP23-201ENST00000605013 2741 ntBASIC20.22■□□□□ 0.83
NINLQ9Y2I6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NINLQ9Y2I6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 NUP210P1-202ENST00000504322 710 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC136759.1-202ENST00000530858 2194 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC018442.1-201ENST00000421439 2061 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 PDIA3P2-201ENST00000428073 158 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AL353637.1-201ENST00000451571 732 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 MIR4754-201ENST00000582477 89 ntBASIC20.21■□□□□ 0.83
NINLQ9Y2I6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NINLQ9Y2I6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NINLQ9Y2I6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NINLQ9Y2I6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 AHCYP4-201ENST00000419201 1315 ntBASIC20.2■□□□□ 0.82
NINLQ9Y2I6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 KRT8P21-201ENST00000430398 1491 ntBASIC20.2■□□□□ 0.82
NINLQ9Y2I6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NINLQ9Y2I6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms