Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.76□□□□□ -0.05
MKS1Q9NXB0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.76□□□□□ -0.05
MKS1Q9NXB0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 HSPA8P5-201ENST00000456928 2069 ntBASIC14.76□□□□□ -0.05
MKS1Q9NXB0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
MKS1Q9NXB0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 AC107890.1-201ENST00000422478 521 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 TSSK5P-201ENST00000423978 907 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 SPDYE18-201ENST00000510091 1050 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 AC138761.1-201ENST00000584393 385 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 BRI3BPP1-201ENST00000594224 787 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 AC007431.3-201ENST00000623221 587 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 AL590560.3-201ENST00000623350 461 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.75□□□□□ -0.05
MKS1Q9NXB0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MKS1Q9NXB0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 FLJ16779-201ENST00000612722 7638 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AL591122.2-201ENST00000624125 1853 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms